Browse of TCMCG005C02818 protein

CDS

Accession Number	TCMCG005C02818
gbkey	CDS
Protein Id	XP_020251306.1
Location	join(99482307..99482321,99483039..99483113,99483228..99483332,99483467..99483577,99483842..99484001,99488991..99489076,99489706..99489828,99489914..99490138,99491876..99491965,99493817..99493978,99497784..99497900,99497979..99498185,99499098..99499199,99499275..99499418,99501535..99501665,99501781..99501900,99502145..99502268,99503154..99503351,99503428..99503546,99503758..99503908,99504001..99504113,99504186..99504267,99504360..99504446,99504536..99504613,99509120..99509320,99511529..99511618,99511697..99511810,99511954..99512121,99512227..99512282,99512371..99512443,99512543..99512733,99512836..99512965,99513060..99513137,99516559..99516723,99519650..99519820,99519900..99520037,99521367..99521507,99521603..99521725,99521880..99521975,99522678..99522815,99524108..99524208,99524761..99524880,99525300..99525378,99526247..99526330)
Gene	LOC109828784
GeneID	109828784
Organism	Asparagus officinalis

Protein

Length	1793aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA376608;
db_source	XM_020395717.1
Definition	nuclear pore complex protein NUP205 isoform X1

EGGNOG-MAPPER Annotation

COG_category	S
Description	Nuclear pore complex scaffold, nucleoporins 186/192/205
KEGG_TC	1.I.1
KEGG_Module	M00427        [VIEW IN KEGG]
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko03019        [VIEW IN KEGG] ko03036        [VIEW IN KEGG]
KEGG_ko	ko:K14310        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko03013        [VIEW IN KEGG] map03013        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005198        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005643        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006913        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0006997        [VIEW IN EMBL-EBI] GO:0006999        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009507        [VIEW IN EMBL-EBI] GO:0009536        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0017056        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043933        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0044611        [VIEW IN EMBL-EBI] GO:0046907        [VIEW IN EMBL-EBI] GO:0051169        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051641        [VIEW IN EMBL-EBI] GO:0051649        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGACGTCCAAATTGCTATTAAGTTAAGTGATGAACTCAACCTTAATGAAATTGAGTGCATCAGGCTCCTCGTTTCTGCCAATAGAGAGTGGGTTCTATTTGGACGAGAACCAATAGAGATTTTTCGTCTCGCAGCAGGCCTTTGGTACACAGAGAGGCGGGATCTTATAACCTCATTGTACACCCTTATGCGGGCTGTTGTGCTCGACCAGGGTCTGGAGGCTGATCTTGTGGTAGACATCCAAAAGTTTCTCAATGATCTTTTTGAATGTGGTTTGAGGCAACGGTTAATAATACTGATAAAGGAACTCAGTCGGGAAGAACCGAGTGGTTTTGGTGGTCCAAATGCTGAACGCTATGTTCTTGATTTTAGAGGTGCTATTGTCTTGAGGCAAGCTGTTGTTTCTCGAGAACGATTAAGCCTTAGTCATTGCCTTGTTCTATCTGTGCTCATTACACGGATCAATCCGAAAGATGTGAAAGATGTTTTTATAACCTTAAAAGATTGTGCAGGTGGAATCAATGATAGTGACTCCACCATACAACTTCAGATCACATTCAGCCTTATGTTTACCCTGGTGATAGCTTTCATATCTGATGCTCTGAGCATAGCTTCAGACAAAGCATCAACATCGTTGCATGATTCTTCCTTCAGTCTTGAATTTCATGGACTACTAATGATTGTTGGGAACATCCCAAACATTGAGGGCTTCGTTGATGTTATAAGACTAGCATGGGCTGTGCACATGATTATATCTCAAGATCAGGGTGCAGGAGATATTTCTTCTGGTGGTTCTTCCAAGGATTTGTCAAATATTTATTCTTGCTTGCAGCTTGTGTGCACAAACAATGTCTTCCAATTCTTACTCACCAGAGTACTTCGGACAGCTGCCTACCAGAATGATGATGAGGATTTGGTTTATATGTATAACGGATACATGCACAAGTTGATGATGTTCTTTCTTTCTCACCCGGTTACACGGGACAAGGTGAAAGAAATGAAGGAGAAGGCTATGACTGCCCTTAGTCCATATATCATGGCAGGAGCGGATGACTTTAGAGATGATCCTTCATTTTATTTGCAACAACATGCCCACATGAGTCGTCAGCCATTCATATCGATTTTGGAGTTGGTTGGTGATGTTTATCAGAAAGAACCAGAGCTTCTGTATGGAAATGAAGAATTGTGGGCGTTTATTAACTTTGCTGGGGAGGATCATACTAATATGCACACTCTTGTTGCTTTCCTGAGAATGCTGAAGGCTCTGGCTTCTAATGAGGAGGGCGCTTCAAAAGTTTTCGAGTTACTTCAGGGTAAAATGTTTCGGTCCGTCCGGTGGAGTACCTTATTTGACTGCATATCCATTTACGAGGAGAAGTTCAAACAATCCCTTCAGAGTTCTGGAAGCATGTTGCCAGAATTTGAGGAAGCTGATGCTCAAGTACTTGTTGCATATTTGGATGTTCTTCAGAAGGTCGTGGAAAATGGAAATCCAGTTGAAAGGAAGAAATGGTTTCCAGATATTGAACCCTTGTTTAAGCTGCTTAGCTATGAGAATGTACCTCCATATCTGAAGGGGGCATTTAGGAGTGCTATTACTGCTTTTGTTCAAGTGTCTCCAGATCTGAAAGAGACTATCTGGACTTATCTTGAGCAATACGATCTTCCTGTAGTTGTGGGTCCGTCTTCCGGGCATAGCGGGCAACATGTACCATCACAGGTTTATGATATGCGGTTTGAACTGAATGAAGTTGAAGCAAGGACCGAAAAGTATCCATCAACAATATCTTTTCTTAACTTGTTGAATGCACTAATTGCAGAAGAAAGAGATGTCACTGATAGAGGCAGAAGGTTTGTGGGAATCTTTAGATTTGTCTATGATCATGTCTTTGGACCTTTCCCTCAGAGAGCATATGCTGATCCGAGTGAGAAGTGGCAGTTGGTTATTGCTTGTCTTCAGCACTTCCACATGGTTCTGAGTATGTACAACTTGAAGGATGGAGATATTGGTGATGCTATTGATATCTCTCAGTCGTCTGCAGTGGCACATGCTTCTCCACTAGAAACACAACTACCCACGGTTGAACTGTTAAAAGACTTCATGAGTGGTAAAGTAGTCTTCCGCAATATTATGAGTATCATCTTGTTGGGAGTGGACACAGTCATCAATGATCGGACTAGCCAAACATTTGGTCAACTTTTGGAGAAAGCTGTGCACCTCTCATTAGAAATCATAGTTCTAGTTTTGGAGAAGGATTTGCTTCTTGCTGATGTCTGGCGTCCATTATACCAGCCCTTGGATATTATATTATCTCAAGATCATAATCAAATAGTTGCTTTGCTGGAGTATGTACGATATGATTTTCTCCCTCAAATCCAGCTGTGCTCGATAAAGATCATGAACATTCTAAGTTCTAGAATGGTTGGACTCGTACCGTTGCTGTTGAAGCTGAATGCAGCAAAAGTCCTAGTTGAGGATTATGCTACTTTGCTCGAGTCCCGTTTTGATGAATGCCATGTCATAGTGAACTCAAAAAATGATGCCGGCGTTCTCATATTGCAGCTTCTTCTTGATAATGTTAATCGCCCACCACCAAATGTCACACATTTACTTCTCAAATTTGATGTAGATAATCCTATTGAGCAGACAGTGCTCCAGCCAAAATTCCATTTCAGTTGCTTGAAGGTTATTCTTGATAATTTGGAAAAGCTTTCAATGCCTGAAGTAAATGCTCTACTGTATGAGTTTGCTTTCCAGCTCGTTTATGAACTGTGCTTGGATCCGTTGACTACTGGTCCTACAATGGATCTGCTAAGTGCTAAAAAATATCAATTCTTTGCAAAGCATCTGGAAGGTTTTGTCATTTCTCCACTACCTAAGAGGAGTACCAATCAGGCTCTTCGAATCAGCACACTCCATCAGAGAGCATGGTTATTGAAACTACTAGCACTGGAATTACATTTAGCTGATGTAGCCTCATCAGGTCATAGAGAAACATGCCTGGCTATTCTCTCTGGGATTTTTGACCAGTGCAATGTTGAGAATGGCAGTGGACCAAGTGCATCCGAAACCTTTGAGATAGATGCAGGTCATGCTGGAAATAGAACCATGAATAATAGTAAGGTCTTACAGCTGCTGGAAATCCTCCAGTTTAGATCGCCTGATATTGCGAAGTACCCTCAGTACATTTCCAATTTGAAATATGATACACTGGTGGAGGAGATTCTTAGAAATCCTGCAGCCTCTGAAATGGGTGGTGTATACTATTACTCAGAACGAGGGGATCGGCTAATTGATCTTGATTCATTCCATGATAAACTATTGGAGATGTTTAAATTTTATAGTCAAGTAAGCTCCCAGTTTAATGAAGTTGAGAATAATGAAGTACGAGAATCTATACGGCAGTTGTTGAGGTGGTGCTGGAGATACAACAAGAACCTTGAAGAACAAGCAGCTCAGCTTCATATGTTGGCTGGGTGGTCCCATGTTGTAGAGGTCTCAATATCTAGAAGAATGTCATTTCTTGTAGATCATTCTCGAGTATTATTCGAAGTTCTTGATGCTTCACTGAGTGCATCTGCTTCTCCAGATTGTTCCTTGAAGATGGCACTGATATTAAGCAATGTTGCACTCACCTGTATGGCTAAGTTGCGGGATGAAAGGTTCTTATATCCTGGAGGTGTAGACTCTGAGAGTCTAACATGCCTTGATATCATATCAGTAAAACAACTCTCAAATGGAGCTTGTCAATCTATCCTATTTAAACTTACAATGGCTATTCTCAGAAATGAATCATCAGAAACCTTGAGACGGCGCCAATATGCATTACTTCTTAGTTACTTTCAGTACTGCCGGAGTATCCTTGACCCAGATATACCAGCATCAGTTTTACGTTTCCTGATTCATGAAGAACAGGATGTAGATGATGGCCTAAATCTTCAGAAGATTGACAGGGAACAAGCTGAACTAGAGCGAGCCAACTTTTCCATATTGCGGAAAGAGGCTCAAGCAATCATTGATGCAGTGACAAAAGATGCTACTCAAGGCAGTGAAGCTGGAAAGGCCATATCACTTTATGTTTTGGATGCGTTTATTAGTATTGATCAAGAGAAGTTCTTCTTGAACCAACTGCAAAGTAGAGGAATTCTGAGATCTTGCCTAACAGATATTAGTAATGTTCCATATAAGGATGGTCGGTGTTCATTAGAATCTTTGCAACGTTTCTGCACCCTTGAAGCACAACTCTTGTTGCTTTTGAGAATTAGCCACCACTACAATAAGCACGGAGCTCAGATTCTACTATCTATGGGCGCTTTGGAACATATTGGCTCATGCAGAGCTGTTGGTTTGCATACCAAGGGAATCGCTAGACGAGGTGGCTCTAGTATTGCCGGAGGTCATGCTGGAGATGTTGATAAGCAGACTTTGCTTGTAACTCCAATATTGAGATTGGTCTCAAGCCTAACATCACTGGTTGAAACATCAGATTTCTTAGAGGTGAAAAACAAAATTGTACGTGAGATAATAGATTTTGTCAAGTGTCACCAGTCAACTTTTTATCAAATTCTGAAGGATGTCTCAGGAGCTAATGAATTAGCCTTAGAAAGAATCAATCTTGTTGTTTCTATACTCAGCAAGGTCTGGCCATATGAAGAAAGCGATGAATATGGTTTTGTTCAAGAACTTTTTAGCATGATGGAATATTTTTTCCAACTTGATTTTGGTTCCAACAATGTTATGCAATCATCTGATTCCGTCGAGAAACAAAGGAAGTTACAGTTGTTCATGTTCCAGTTATCTTTTAGCCTGAGCTCTTACCTGTATTTTCTGGTGACTAAGAAGCTTTTGAGGTTGCAGGTGTTGGATGGTACTGGCGATAGTAGTGACTCTATTGGACAGCAGCAACCTACATTACTTTCACTTGTACACCTTCTTTATTCAATTACTGTTGCTTTGGAGAGAACTGGTGAAGAAAAATTCTTACTGCTCAACAAGATCCAAGATATCAATGAACTATCTAGACAGGAGGTTGATGAAATTATCACTGCTTGCACCAGACAAGACTGCATATCTTCACATGATAATATTCGGAAGCGGAGATACATTGCAATGGTAGAAATGTGTCGCATTGTTGGGAGTCGGGATCAACTAATTACTCTGTTGCTTCGGCTTGCAGAACGTTGTTTTAACATTCTTCTAATCCATTTACAGGATGAGAATACTGACTCGAATGACCTTTCTTTATTGTGTGGAAAGCTACATCCAACATTAGAAAGACTAGAGCAGTTGAGGGAGGAGAAAATTGGACAAGCTCTGAAATTGTTCCAGAGATCTGTAAGCACTCTCAAGGAAATTTCTGTTAGGAATCTGGCCCCCTAG

Protein:   MDVQIAIKLSDELNLNEIECIRLLVSANREWVLFGREPIEIFRLAAGLWYTERRDLITSLYTLMRAVVLDQGLEADLVVDIQKFLNDLFECGLRQRLIILIKELSREEPSGFGGPNAERYVLDFRGAIVLRQAVVSRERLSLSHCLVLSVLITRINPKDVKDVFITLKDCAGGINDSDSTIQLQITFSLMFTLVIAFISDALSIASDKASTSLHDSSFSLEFHGLLMIVGNIPNIEGFVDVIRLAWAVHMIISQDQGAGDISSGGSSKDLSNIYSCLQLVCTNNVFQFLLTRVLRTAAYQNDDEDLVYMYNGYMHKLMMFFLSHPVTRDKVKEMKEKAMTALSPYIMAGADDFRDDPSFYLQQHAHMSRQPFISILELVGDVYQKEPELLYGNEELWAFINFAGEDHTNMHTLVAFLRMLKALASNEEGASKVFELLQGKMFRSVRWSTLFDCISIYEEKFKQSLQSSGSMLPEFEEADAQVLVAYLDVLQKVVENGNPVERKKWFPDIEPLFKLLSYENVPPYLKGAFRSAITAFVQVSPDLKETIWTYLEQYDLPVVVGPSSGHSGQHVPSQVYDMRFELNEVEARTEKYPSTISFLNLLNALIAEERDVTDRGRRFVGIFRFVYDHVFGPFPQRAYADPSEKWQLVIACLQHFHMVLSMYNLKDGDIGDAIDISQSSAVAHASPLETQLPTVELLKDFMSGKVVFRNIMSIILLGVDTVINDRTSQTFGQLLEKAVHLSLEIIVLVLEKDLLLADVWRPLYQPLDIILSQDHNQIVALLEYVRYDFLPQIQLCSIKIMNILSSRMVGLVPLLLKLNAAKVLVEDYATLLESRFDECHVIVNSKNDAGVLILQLLLDNVNRPPPNVTHLLLKFDVDNPIEQTVLQPKFHFSCLKVILDNLEKLSMPEVNALLYEFAFQLVYELCLDPLTTGPTMDLLSAKKYQFFAKHLEGFVISPLPKRSTNQALRISTLHQRAWLLKLLALELHLADVASSGHRETCLAILSGIFDQCNVENGSGPSASETFEIDAGHAGNRTMNNSKVLQLLEILQFRSPDIAKYPQYISNLKYDTLVEEILRNPAASEMGGVYYYSERGDRLIDLDSFHDKLLEMFKFYSQVSSQFNEVENNEVRESIRQLLRWCWRYNKNLEEQAAQLHMLAGWSHVVEVSISRRMSFLVDHSRVLFEVLDASLSASASPDCSLKMALILSNVALTCMAKLRDERFLYPGGVDSESLTCLDIISVKQLSNGACQSILFKLTMAILRNESSETLRRRQYALLLSYFQYCRSILDPDIPASVLRFLIHEEQDVDDGLNLQKIDREQAELERANFSILRKEAQAIIDAVTKDATQGSEAGKAISLYVLDAFISIDQEKFFLNQLQSRGILRSCLTDISNVPYKDGRCSLESLQRFCTLEAQLLLLLRISHHYNKHGAQILLSMGALEHIGSCRAVGLHTKGIARRGGSSIAGGHAGDVDKQTLLVTPILRLVSSLTSLVETSDFLEVKNKIVREIIDFVKCHQSTFYQILKDVSGANELALERINLVVSILSKVWPYEESDEYGFVQELFSMMEYFFQLDFGSNNVMQSSDSVEKQRKLQLFMFQLSFSLSSYLYFLVTKKLLRLQVLDGTGDSSDSIGQQQPTLLSLVHLLYSITVALERTGEEKFLLLNKIQDINELSRQEVDEIITACTRQDCISSHDNIRKRRYIAMVEMCRIVGSRDQLITLLLRLAERCFNILLIHLQDENTDSNDLSLLCGKLHPTLERLEQLREEKIGQALKLFQRSVSTLKEISVRNLAP